PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5DL_5C93510D5.1
Common NameWRKY
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 351aa    MW: 37021.2 Da    PI: 6.2265
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5DL_5C93510D5.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY833e-26125184258
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                            dDg +WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+r++edp +++++Y+geH++
  Traes_5DL_5C93510D5.1 125 DDGRSWRKYGQKDILGAQHPRAYYRCTYQktqGCAATKQVQRADEDPALFDVIYHGEHTC 184
                            8***************************98999*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-27115185IPR003657WRKY domain
PROSITE profilePS5081121.758119182IPR003657WRKY domain
SuperFamilySSF1182907.98E-24123184IPR003657WRKY domain
SMARTSM007742.1E-37124186IPR003657WRKY domain
PfamPF031069.9E-26125184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MEAVHEGNGG GSGLVVTELS HIKELVKQLD VHLGGSPDLC KLLAQQIFAV TERSIGMIRS  60
GHFNGPKRPA AGAGLDSPPL SPTPSPLSGV SNTPFKPNKK RKTSEKGGRQ IRVSSAAGGA  120
DAPADDGRSW RKYGQKDILG AQHPRAYYRC TYQKTQGCAA TKQVQRADED PALFDVIYHG  180
EHTCVHKTAA AAVQPAGQNP GAESLLQSLS SSLTVKTEGL TAAGAQGWSA TTPFSFSSPA  240
VSGMTPPEHH PFSTPSTPEN CFVSMPTSLE PSPATSGSNH MCMTPFHAQS ELQTMVSALV  300
EATSMPAAGT EEAAFYTFQS DWSFDDSALD VNNFDVSALD VNNFDVSVFL A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2865660.0DQ286566.1 Triticum aestivum WRKY transcription factor (WRKY) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003576431.11e-107PREDICTED: WRKY transcription factor 6-like
TrEMBLA0MAV00.0A0MAV0_WHEAT; Uncharacterized protein
STRINGMLOC_52504.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-28WRKY DNA-binding protein 46
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]